Biblio

Kasalicky, V., Y. Zeng, K. Piwosz, K. Šimek, H. Kratochvilová, and M. Koblizek. 2018. Aerobic anoxygenic photosynthesis is commonly present within the genus Limnohabitans. Applied and Environmental Microbiology 84: e02116-17.

Šimek, K., V. Kasalicky, E. Zapomelova, and K. Hornak. 2011. Algal-derived substrates select for distinct betaproteobacterial lineages and contribute to niche separation in Limnohabitans strains. Appl. Environ. Microbiol. 77: 7307-7315.

Šimek, K., V. Kasalicky, K. Hornak, M. W. Hahn, and M. G. Weinbauer. 2010. Assessing niche separation in coexisting Limnohabitans strains through interactions with a competitor, viruses, and a bacterivore. Applied and Environmental Microbiology 76: 1406–1416.

Šimek, K., V. Grujčić, M. W. Hahn, K. Hornak, J. Jezberová, V. Kasalicky, J. Nedoma, M. M. Salcher, and T. Shabarova. 2018. Bacterial prey food characteristics modulate community growth response of freshwater bacterivorous flagellates. Limnol. Oceanogr , doi:10.1002/lno.10759

Šimek, K., V. Kasalicky, J. Jezbera, J. Jezberova, J. Hejzlar, and M. W. Hahn. 2010. Broad habitat range of the phylogenetically narrow R-BT065 cluster representing a core group of the betaproteobacterial genus Limnohabitans. Applied and Environmental Microbiology 76: 631-639.

Šimek, K., V. Grujčić, I. Mukherjee, V. Kasalický, J. Nedoma, T. Posch, M. Mehrshad, and M. M. Salcher. 2020. Cascading effects in freshwater microbial food webs by predatory Cercozoa, Katablepharidacea and ciliates feeding on aplastidic bacterivorous cryptophytes. FEMS Microbiology Ecology 96: fiaa121.

Grujčić, V., J. Nuy, M. M. Salcher, T. Shabarova, V. Kasalicky, J. Boenigk, M. Jensen, and K. Šimek. 2018. Cryptophyta as major freshwater bacterivores in experiments with manipulated bacterial prey. ISME

Šimek, K., V. Kasalicky, J. Jezbera, K. Hornak, J. Nedoma, M. W. Hahn, D. Bass, S. Jost, and J. Boenigk. 2013. Differential freshwater flagellate community response to bacterial food quality with a focus on Limnohabitans bacteria. ISME Journal 7: 1519-1530.

Shabarova, T., V. Kasalicky, K. Šimek, J. Nedoma, P. Znachor, T. Posch, J. Pernthaler, and M. M. Salcher. 2017. Distribution and ecological preferences of the freshwater lineage LimA (genus Limnohabitans) revealed by a new double hybridization approach. Environmental Microbiology 19: 1296–1309.

Kasalicky, V., J. Jezbera, K. Šimek, and M. W. Hahn. 2013. The diversity of the Limnohabitans genus, an important group of freshwater bacterioplankton, by characterization of 35 isolated strains. PLoS ONE 8: e58209.

Šimek, K., J. Nedoma, P. Znachor, V. Kasalicky, J. Jezbera, K. Hornak, and J. Seda. 2014. A finely tuned symphony of factors modulates the microbial food web of a freshwater reservoir in spring. Limnology and Oceanography 59: 1477–1492.

Zeng, Y., V. Kasalicky, K. Šimek, and M. Koblizek. 2012. Genome Sequences of Two Freshwater Betaproteobacterial Isolates, Limnohabitans Species Strains Rim28 and Rim47, Indicate Their Capabilities as Both Photoautotrophs and Ammonia Oxidizers. Journal of Bacteriology 194: 6302-6303.

Salcher, M. M., C. Ewert, K. Šimek, V. Kasalicky, and T. Posch. 2016. Interspecific competition and protistan grazing affect the coexistence of freshwater betaproteobacterial strains. FEMS Microbiology Ecology 92, doi:10.1093/femsec/fiv156

Hahn, M. W., V. Kasalicky, J. Jezbera, U. Brandt, and K. Šimek. 2010. Limnohabitans australis sp. nov., isolated from a freshwater. J. Syst. Evol. Microbiol 60: 2946 - 2950.

Hahn, M. W., V. Kasalicky, J. Jezbera, U. Brandt, J. Jezberova, and K. Šimek. 2010. Limnohabitans curvus gen. nov., sp. nov., a planktonic bacterium isolated from a freshwater lake. International Journal of Systematic and Evolutionary Microbiology 60: 1358-1365.

Jezberova, J., J. Jezbera, P. Znachor, J. Nedoma, V. Kasalicky, and K. Šimek. 2017. Limnohabitans genus harbor generalist and opportunist genotype groups: evidence from spatiotemporal succession in a canyon-shaped reservoir. Appl. Environ. Microbiol. 83: e01530-17.

Kasalicky, V., J. Jezbera, K. Šimek, and M. W. Hahn. 2010. Limnohabitans planktonicus sp. nov., and Limnohabitans parvus sp. nov., two novel planktonic Betaproteobacteria isolated from a freshwater reservoir. International Journal of Systematic and Evolutionary Microbiology 60: 2710 - 2714.

Jezbera, J., J. Jezberova, V. Kasalicky, K. Šimek, and M. W. Hahn. 2013. Patterns of Limnohabitans microdiversity across a large set of freshwater habitats as revealed by Reverse Line Blot Hybridization. PLoS ONE 8: e58527.

Grujčić, V., V. Kasalicky, and K. Šimek. 2015. Prey-specific growth responses of freshwater flagellate communities induced by morphologically distinct bacteria from the genus Limnohabitans. Applied and Environmental Microbiology 81: 4993–5002.

Hornak, K., V. Kasalicky, K. Šimek, and H. - P. Grossart. 2017. Strain-specific consumption and transformation of alga-derived dissolved organic matter by members of the Limnohabitans-C and Polynucleobacter-B clusters of Betaproteobacteria. Environ. Microbiol. 19: 4519–4535.