Biblio

Chytrý, M., T. Kučera, M. Kočí, V. Grulich, and P. Lustyk. 2010. Katalog biotopů České republiky, Agentura ochrany přírody a krajiny.

Gryndler, M., P. Šmilauer, D. Puschel, P. Bukovská, H. Hršelová, M. Hujslová, H. Gryndlerová, O. Beskid, T. Konvalinková, and J. Jansa. 2018. Appropriate nonmycorrhizal controls in arbuscular mycorrhiza research: a microbiome perspective. Mycorrhiza 28: 435-450.

Gryndler, M., P. Šmilauer, D. Puschel, P. Bukovská, H. Hršelová, M. Hujslová, H. Gryndlerová, O. Beskid, T. Konvalinková, and J. Jansa. 2018. Appropriate nonmycorrhizal controls in arbuscular mycorrhiza research: a microbiome perspective. Mycorrhiza 28: 435-450.

Vatova, M., C. Rubin, H. P. Grossart, S. C. Gonçalves, S. I. Schmidt, and I. Jarić. 2022. Aquatic fungi: largely neglected targets for conservation. Frontiers in Ecology and the Environment 20: 207-209.

Vatova, M., C. Rubin, H. P. Grossart, S. C. Gonçalves, S. I. Schmidt, and I. Jarić. 2022. Aquatic fungi: largely neglected targets for conservation. Frontiers in Ecology and the Environment 20: 207-209.

Šimek, K., V. Grujčić, M. W. Hahn, K. Hornak, J. Jezberová, V. Kasalicky, J. Nedoma, M. M. Salcher, and T. Shabarova. 2018. Bacterial prey food characteristics modulate community growth response of freshwater bacterivorous flagellates. Limnol. Oceanogr , doi:10.1002/lno.10759

Vicherová, E., R. Glinwood, T. Hájek, P. Smilauer, and V. Ninkovic. 2020. Bryophytes can recognize their neighbours through volatile organic compounds. Scientific Reports 10: 7405.

Comerma, A., J. - C. Garcia, M. Romero, J. Armengol, and K. Šimek. 2003. Carbon flow dynamics in the pelagic community of the Sau Reservoir (Catalonia, NE Spain). Hydrobiologia 504: 87-98.

Šimek, K., V. Grujčić, I. Mukherjee, V. Kasalický, J. Nedoma, T. Posch, M. Mehrshad, and M. M. Salcher. 2020. Cascading effects in freshwater microbial food webs by predatory Cercozoa, Katablepharidacea and ciliates feeding on aplastidic bacterivorous cryptophytes. FEMS Microbiology Ecology 96: fiaa121.

Šimek, K., J. Armengol, M. Comerma, J. - C. Garcia, P. Kojecka, J. Nedoma, and J. Hejzlar. 2001. Changes in the epilimnetic bacterial community composition, production, and protist-induced mortality along the longitudinal axis of a highly eutrophic reservoir. Microbial Ecology 42: 359-371.

Šimek, K., J. Armengol, M. Comerma, J. - C. Garcia, T. H. Chrzanowski, M. Macek, J. Nedoma, and V. Straskrabova. 1998. Characteristics of protistan control of bacterial production in three reservoirs of different trophy. International Review of Hydrobiology 83: 485-494.

Mujakić, I., A. - Ş. Andrei, T. Shabarova, L. Kolesár-Fecskeová, M. M. Salcher, K. Piwosz, R. Ghai, and M. Koblížek. 2021. Common presence of phototrophic Gemmatimonadota in temperate freshwater lakes. mSystems 9: e01241-20.

Šimek, K., I. Mukherjee, T. Szöke-Nagy, M. Haber, M. M. Salcher, and R. Ghai. 2022. Cryptic and ubiquitous aplastidic cryptophytes are key freshwater flagellated bacterivores. The ISME Journal

Grujčić, V., J. Nuy, M. M. Salcher, T. Shabarova, V. Kasalicky, J. Boenigk, M. Jensen, and K. Šimek. 2018. Cryptophyta as major freshwater bacterivores in experiments with manipulated bacterial prey. ISME

Jansa, J., P. Smilauer, J. Boroviška, H. Hršelová, S. T. Forczek, K. Slámová, T. Řezanka, M. Rozmoš, P. Bukovská, and M. Gryndler. 2020. Dead Rhizophagus irregularis biomass mysteriously stimulates plant growth. Mycorrhiza accepted, doi:10.1007/s00572-020-00937-z

Kristufek, V., K. Šimek, B. Grunda, and P. Puncochar. 1987. Determination of the number of bacteria in the soil by epifluorescence microscopy using membrane filters. Folia Microbiologica 32: 506-507.

Tanaka, T., F. T. Thingstad, J. M. Gasol, C. Cardelus, J. Jezbera, M. M. Sala, K. Šimek, and F. Unrein. 2009. Determining the availability of phosphate and glucose for bacteria in P-limited mesocosms of NW Mediterranean surface waters. Aquatic Microbial Ecology 56: 81-91.

Lennox, R. J., V. Sbragaglia, K. W. Vollset, L. K. Sortland, L. McClenachan, I. Jarić, M. L. Guckian, K. Ferter, A. J. Danylchuk, S. J. Cooke, R. Arlinghaus, and W. M. Twardek. 2022. Digital fisheries data in the Internet age: emerging tools for research and monitoring using online data in recreational fisheries. Fish and Fisheries 23: 926-940.

Oulehle, F., C. L. Goodale, C. D. Evans, T. Chuman, J. Hruska, P. Krám, T. Navrátil, M. Tesař, A. Ač, O. Urban, and K. Tahovska. 2021. Dissolved and gaseous nitrogen losses in forests controlled by soil nutrient stoichiometry. Environmental Research Letters 16: 064025.

Francová, K., K. Šumberová, A. Kučerová, M. Sorf, S. Grill, N. Exler, and J. Vrba. 2021. Drivers of plant species composition of ecotonal vegetation in two fishpond management types. Wetlands Ecology and Management 29: 93–110.

Jorgensen, C., K. Enberg, E. S. Dunlop, R. Arlinghaus, David S. Boukal, K. Brander, B. Ernande, A. Gaerdmark, F. D. Johnston, S. Matsumura, H. Pardoe, K. Raab, A. Silva, A. Vainikka, U. Dieckmann, M. Heino, and A. D. Rijnsdorp. 2007. Ecology - Managing evolving fish stocks. SCIENCE 318: 1247-1248.

Šimek, K., M. Comerma, J. C. García, R. Marcé, J. Nedoma, and J. Armengol. 2011. The effect of river water circulation on the distribution and functioning of reservoir microbial communities as determined by a relative distance approach. Ecosystems 14: 1–14.

Hornak, K., J. Jezbera, J. Nedoma, J. M. Gasol, and K. Šimek. 2006. Effects of resource availability and bacterivory on leucine incorporation in different groups of freshwater bacterioplankton, assessed using microautoradiography. Aquatic Microbial Ecology 45: 277-289.

Nedoma, J., J. - C. Garcia, M. Comerma, K. Šimek, and J. Armengol. 2006. Extracellular phosphatases in a Mediterranean reservoir: seasonal, spatial and kinetic heterogeneity. Freshwater Biology 51: 1264-1276.

Tapkir, S. D., P. Kumkar, S. M. Gosavi, S. S. Kharat, J. Patoka, and L. Kalous. 2021. Far from home: Tracking the global ornamental fish trade in endangered zebra loach, Botia striata, from freshwater ecoregion and biodiversity hotspot in India. Journal for Nature Conservation 61: 126007.