Biblio | Department of Ecosystem Biology

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C

Heino, M., L. Baulier, David S. Boukal, B. Ernande, F. D. Johnston, F. M. Mollet, H. Pardoe, N. O. Therkildsen, S. Uusi-Heikkila, A. Vainikka, R. Arlinghaus, D. J. Dankel, E. S. Dunlop, A. Maria Eikeset, K. Enberg, G. H. Engelhard, C. Jorgensen, A. T. Laugen, S. Matsumura, S. Nussle, D. Urbach, R. Whitlock, A. D. Rijnsdorp, and U. Dieckmann. 2013. Can fisheries-induced evolution shift reference points for fisheries management?. ICES JOURNAL OF MARINE SCIENCE 70: 707-721.

Heino, M., L. Baulier, David S. Boukal, B. Ernande, F. D. Johnston, F. M. Mollet, H. Pardoe, N. O. Therkildsen, S. Uusi-Heikkila, A. Vainikka, R. Arlinghaus, D. J. Dankel, E. S. Dunlop, A. Maria Eikeset, K. Enberg, G. H. Engelhard, C. Jorgensen, A. T. Laugen, S. Matsumura, S. Nussle, D. Urbach, R. Whitlock, A. D. Rijnsdorp, and U. Dieckmann. 2013. Can fisheries-induced evolution shift reference points for fisheries management?. ICES JOURNAL OF MARINE SCIENCE 70: 707-721.

Travnicek, P., J. Ponert, T. Urfus, J. Jersakova, J. Vrana, E. Hřibová, J. Dolezal, and J. Suda. 2015. Challenges of flow-cytometric estimation of nuclear genome size in orchids, a plant group with both whole-genome and progressively partial endoreplication. Cytometry 87: 958–966.

Kaštovská, E., P. Strakova, K. R. Edwards, Z. Urbanova, J. Bárta, J. Mastny, H. Santruckova, and T. Picek. 2018. Cotton-Grass and Blueberry have Opposite Effect on Peat Characteristics and Nutrient Transformation in Peatland. Ecosystems 21: 443-458.

D

Tanaka, T., F. T. Thingstad, J. M. Gasol, C. Cardelus, J. Jezbera, M. M. Sala, K. Šimek, and F. Unrein. 2009. Determining the availability of phosphate and glucose for bacteria in P-limited mesocosms of NW Mediterranean surface waters. Aquatic Microbial Ecology 56: 81-91.

Oulehle, F., C. L. Goodale, C. D. Evans, T. Chuman, J. Hruska, P. Krám, T. Navrátil, M. Tesař, A. Ač, O. Urban, and K. Tahovska. 2021. Dissolved and gaseous nitrogen losses in forests controlled by soil nutrient stoichiometry. Environmental Research Letters 16: 064025.

Gittel, A., J. Bárta, I. Kohoutova, R. Mikutta, S. M. Owens, J. Gilbert, J. Schnecker, B. Wild, B. Hannisdal, J. Maerz, N. Lashchinskiy, P. Čapek, N. Gentsch, O. Shibistova, G. Guggenberger, A. Richter, V. L. Torsvik, C. Schleper, and T. Urich. 2014. Distinct microbial communities associated with buried soils in the Siberian tundra. ISME JOURNAL 8: 841-853.

E

Urbanova, Z., T. Picek, and J. Bárta. 2011. Effect of peat re-wetting on carbon and nutrient fluxes, greenhouse gas production and diversity of methanogenic archaeal community. ECOLOGICAL ENGINEERING 37: 1017-1026.

Urbanova, Z., and J. Bárta. 2016. Effects of long-term drainage on microbial community composition vary between peatland types. Soil Biology & Biochemistry 92: 16-26.

Schnecker, J., B. Wild, F. Hofhansl, R. J. Eloy Alves, J. Bárta, P. Čapek, L. Fuchslueger, N. Gentsch, A. Gittel, G. Guggenberger, A. Hofer, S. Kienzl, A. Knoltsch, N. Lashchinskiy, R. Mikutta, O. Shibistova, M. Takriti, T. Urich, G. Weltin, and A. Richter. 2014. Effects of Soil Organic Matter Properties and Microbial Community Composition on Enzyme Activities in Cryoturbated Arctic Soils. PLOS ONE 9, doi:10.1371/journal.pone.0094076

Laugen, A. T., G. H. Engelhard, R. Whitlock, R. Arlinghaus, D. J. Dankel, E. S. Dunlop, A. Maria Eikeset, K. Enberg, C. Jorgensen, S. Matsumura, S. Nussle, D. Urbach, L. Baulier, David S. Boukal, B. Ernande, F. D. Johnston, F. M. Mollet, H. Pardoe, N. O. Therkildsen, S. Uusi-Heikkilae, A. Vainikka, M. Heino, A. D. Rijnsdorp, and U. Dieckmann. 2014. Evolutionary impact assessment: accounting for evolutionary consequences of fishing in an ecosystem approach to fisheries management. FISH AND FISHERIES 15: 65-96.

Laugen, A. T., G. H. Engelhard, R. Whitlock, R. Arlinghaus, D. J. Dankel, E. S. Dunlop, A. Maria Eikeset, K. Enberg, C. Jorgensen, S. Matsumura, S. Nussle, D. Urbach, L. Baulier, David S. Boukal, B. Ernande, F. D. Johnston, F. M. Mollet, H. Pardoe, N. O. Therkildsen, S. Uusi-Heikkilae, A. Vainikka, M. Heino, A. D. Rijnsdorp, and U. Dieckmann. 2014. Evolutionary impact assessment: accounting for evolutionary consequences of fishing in an ecosystem approach to fisheries management. FISH AND FISHERIES 15: 65-96.

F

Varsadiya, M., T. Urich, G. Hugelius, and J. Barta. 2021. Fungi in Permafrost-Affected Soils of the Canadian Arctic: Horizon- and Site-Specific Keystone Taxa Revealed by Co-Occurrence Network. Microorganisms 9: 1943.

G

Jersakova, J., P. Travnicek, B. Kubatova, J. Krejcikova, T. Urfus, Z. - J. Liu, A. Lamb, J. Ponert, K. Schulte, V. Curn, J. Vrana, I. J. Leitch, and J. Suda. 2013. Genome size variation in Orchidaceae subfamily Apostasioideae: filling the phylogenetic gap. Botanical Journal of the Linnean Society 172: 95–105.

Uhlirova, E., and H. Santruckova. 2003. Growth rate of bacteria is affected by soil texture and extraction procedure. Soil Biology & Biochemistry 35: 217–224.

I

Elhottova, D., V. Kristufek, J. Triska, V. Chrastny, E. Uhlirova, J. Kalcik, and T. Picek. 2006. Immediate impact of the flood (Bohemia, August 2002) on selected soil characteristics. Water Air and Soil Pollution 173: 177-193.

Wild, B., J. Schnecker, R. J. Eloy Alves, P. Barsukov, J. Bárta, P. Čapek, N. Gentsch, A. Gittel, G. Guggenberger, N. Lashchinskiy, R. Mikutta, O. Rusalimova, O. Shibistova, T. Urich, M. Watzka, G. Zrazhevskaya, and A. Richter. 2014. Input of easily available organic C and N stimulates microbial decomposition of soil organic matter in arctic permafrost soil. SOIL BIOLOGY & BIOCHEMISTRY 75: 143-151.

L

Verbeke, B. A., L. J. Lamit, E. A. Lilleskov, S. B. Hodgkins, N. Basiliko, E. S. Kane, R. Andersen, R. R. E. Artz, Z. Urbanová, al. et, and J. P. Chanton. 2022. Latitude, Elevation, and Mean Annual Temperature Predict Peat Organic Matter Chemistry at a Global Scale. Global Biogeochemical Cycles 36, doi:10.1029/2021GB007057

Urbanova, M., J. Snajdr, V. Brabcova, V. Merhautova, P. Dobiasova, T. Cajthaml, D. Vanek, J. Frouz, and P. Baldrian. 2014. Litter decomposition along a primary post-mining chronosequence. BIOLOGY AND FERTILITY OF SOILS 50: 827-837.

Choma, M., J. Bárta, H. Santruckova, and T. Urich. 2016. Low abundance of Archaeorhizomycetes among fungi in soil metatranscriptomes.

M

Urbanova, Z., J. Bárta, and T. Picek. 2013. Methane Emissions and Methanogenic Archaea on Pristine, Drained and Restored Mountain Peatlands, Central Europe. ECOSYSTEMS 16: 664-677.

Urbanova, Z., and J. Bárta. 2014. Microbial community composition and in silico predicted metabolic potential reflect biogeochemical gradients between distinct peatland types. FEMS Microbiology Ecology 90: 633-646.

Uhlirova, E., M. Šimek, and H. Santruckova. 2005. Microbial transformation of organic matter in soils of montane grasslands under different management. Applied Soil Ecology 28: 225–235.

Varsadiya, M., T. Urich, G. Hugelius, and J. Bárta. 2021. Microbiome structure and functional potential in permafrost soils of the Western Canadian Arctic. FEMS Microbiology Ecology 97: fiab008.

N

Wild, B., J. Schnecker, J. Bárta, P. Čapek, G. Guggenberger, F. Hofhansl, C. Kaiser, N. Lashchinskiy, R. Mikutta, M. Mooshammer, O. Shibistova, T. Urich, S. A. Zimov, and A. Richter. 2013. Nitrogen dynamics in Turbic Cryosols from Siberia and Greenland. SOIL BIOLOGY & BIOCHEMISTRY 67: 85-93.