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Heino, M., L. Baulier, David S. Boukal, B. Ernande, F. D. Johnston, F. M. Mollet, H. Pardoe, N. O. Therkildsen, S. Uusi-Heikkila, A. Vainikka, R. Arlinghaus, D. J. Dankel, E. S. Dunlop, A. Maria Eikeset, K. Enberg, G. H. Engelhard, C. Jorgensen, A. T. Laugen, S. Matsumura, S. Nussle, D. Urbach, R. Whitlock, A. D. Rijnsdorp, a U. Dieckmann. 2013. Can fisheries-induced evolution shift reference points for fisheries management?. ICES JOURNAL OF MARINE SCIENCE 70: 707-721.

Heino, M., L. Baulier, David S. Boukal, B. Ernande, F. D. Johnston, F. M. Mollet, H. Pardoe, N. O. Therkildsen, S. Uusi-Heikkila, A. Vainikka, R. Arlinghaus, D. J. Dankel, E. S. Dunlop, A. Maria Eikeset, K. Enberg, G. H. Engelhard, C. Jorgensen, A. T. Laugen, S. Matsumura, S. Nussle, D. Urbach, R. Whitlock, A. D. Rijnsdorp, a U. Dieckmann. 2013. Can fisheries-induced evolution shift reference points for fisheries management?. ICES JOURNAL OF MARINE SCIENCE 70: 707-721.

Travnicek, P., J. Ponert, T. Urfus, J. Jersakova, J. Vrana, E. Hřibová, J. Dolezal, a J. Suda. 2015. Challenges of flow-cytometric estimation of nuclear genome size in orchids, a plant group with both whole-genome and progressively partial endoreplication. Cytometry 87: 958–966.

Kaštovská, E., P. Strakova, K. R. Edwards, Z. Urbanova, J. Bárta, J. Mastny, H. Santruckova, a T. Picek. 2018. Cotton-Grass and Blueberry have Opposite Effect on Peat Characteristics and Nutrient Transformation in Peatland. Ecosystems 21: 443-458.

Tanaka, T., F. T. Thingstad, J. M. Gasol, C. Cardelus, J. Jezbera, M. M. Sala, K. Šimek, a F. Unrein. 2009. Determining the availability of phosphate and glucose for bacteria in P-limited mesocosms of NW Mediterranean surface waters. Aquatic Microbial Ecology 56: 81-91.

Oulehle, F., C. L. Goodale, C. D. Evans, T. Chuman, J. Hruska, P. Krám, T. Navrátil, M. Tesař, A. Ač, O. Urban, a K. Tahovska. 2021. Dissolved and gaseous nitrogen losses in forests controlled by soil nutrient stoichiometry. Environmental Research Letters 16: 064025.

Urbanova, Z., a J. Bárta. 2016. Effects of long-term drainage on microbial community composition vary between peatland types. Soil Biology & Biochemistry 92: 16-26.

Laugen, A. T., G. H. Engelhard, R. Whitlock, R. Arlinghaus, D. J. Dankel, E. S. Dunlop, A. Maria Eikeset, K. Enberg, C. Jorgensen, S. Matsumura, S. Nussle, D. Urbach, L. Baulier, David S. Boukal, B. Ernande, F. D. Johnston, F. M. Mollet, H. Pardoe, N. O. Therkildsen, S. Uusi-Heikkilae, A. Vainikka, M. Heino, A. D. Rijnsdorp, a U. Dieckmann. 2014. Evolutionary impact assessment: accounting for evolutionary consequences of fishing in an ecosystem approach to fisheries management. FISH AND FISHERIES 15: 65-96.

Laugen, A. T., G. H. Engelhard, R. Whitlock, R. Arlinghaus, D. J. Dankel, E. S. Dunlop, A. Maria Eikeset, K. Enberg, C. Jorgensen, S. Matsumura, S. Nussle, D. Urbach, L. Baulier, David S. Boukal, B. Ernande, F. D. Johnston, F. M. Mollet, H. Pardoe, N. O. Therkildsen, S. Uusi-Heikkilae, A. Vainikka, M. Heino, A. D. Rijnsdorp, a U. Dieckmann. 2014. Evolutionary impact assessment: accounting for evolutionary consequences of fishing in an ecosystem approach to fisheries management. FISH AND FISHERIES 15: 65-96.

Varsadiya, M., T. Urich, G. Hugelius, a J. Barta. 2021. Fungi in Permafrost-Affected Soils of the Canadian Arctic: Horizon- and Site-Specific Keystone Taxa Revealed by Co-Occurrence Network. Microorganisms 9: 1943.

Jersakova, J., P. Travnicek, B. Kubatova, J. Krejcikova, T. Urfus, Z. - J. Liu, A. Lamb, J. Ponert, K. Schulte, V. Curn, J. Vrana, I. J. Leitch, a J. Suda. 2013. Genome size variation in Orchidaceae subfamily Apostasioideae: filling the phylogenetic gap. Botanical Journal of the Linnean Society 172: 95–105.

Uhlirova, E., a H. Santruckova. 2003. Growth rate of bacteria is affected by soil texture and extraction procedure. Soil Biology & Biochemistry 35: 217–224.

Elhottova, D., V. Kristufek, J. Triska, V. Chrastny, E. Uhlirova, J. Kalcik, a T. Picek. 2006. Immediate impact of the flood (Bohemia, August 2002) on selected soil characteristics. Water Air and Soil Pollution 173: 177-193.

Verbeke, B. A., L. J. Lamit, E. A. Lilleskov, S. B. Hodgkins, N. Basiliko, E. S. Kane, R. Andersen, R. R. E. Artz, Z. Urbanová, al. et, a J. P. Chanton. 2022. Latitude, Elevation, and Mean Annual Temperature Predict Peat Organic Matter Chemistry at a Global Scale. Global Biogeochemical Cycles 36, doi:10.1029/2021GB007057

Choma, M., J. Bárta, H. Santruckova, a T. Urich. 2016. Low abundance of Archaeorhizomycetes among fungi in soil metatranscriptomes.

Baltar, F., J. Palovaara, F. Unrein, P. Catala, K. Hornak, K. Šimek, D. Vaque, R. Massana, J. M. Gasol, a J. Pinhassi. 2016. Marine bacterial community structure resilience to changes in protist predation under phytoplankton bloom conditions. ISME Journal 10: 568-581.

Urbanova, Z., a J. Bárta. 2014. Microbial community composition and in silico predicted metabolic potential reflect biogeochemical gradients between distinct peatland types. FEMS Microbiology Ecology 90: 633-646.

Uhlirova, E., M. Šimek, a H. Santruckova. 2005. Microbial transformation of organic matter in soils of montane grasslands under different management. Applied Soil Ecology 28: 225–235.

Varsadiya, M., T. Urich, G. Hugelius, a J. Bárta. 2021. Microbiome structure and functional potential in permafrost soils of the Western Canadian Arctic. FEMS Microbiology Ecology 97: fiab008.

Uhlirova, E., D. Elhottova, J. Triska, a H. Santruckova. 2005. Physiology and microbial community structure in soil at extreme water content. Folia Microbiologica 50: 161–166.

Čapek, P., S. Manzoni, E. Kaštovská, B. Wild, K. Diakova, J. Bárta, J. Schnecker, C. Biasi, P. J. Martikainen, R. J. Eloy Alves, G. Guggenberger, N. Gentsch, G. Hugelius, J. Palmtag, R. Mikutta, O. Shibistova, T. Urich, C. Schleper, A. Richer, a H. Santruckova. 2018. A plant–microbe interaction framework explaining nutrient effects on primary production. Nature Ecology & Evolution 2: 1588–1596.

Tesitelova, T., J. Jersakova, M. Roy, B. Kubatova, J. Tesitel, T. Urfus, P. Travnicek, a J. Suda. 2013. Ploidy-specific symbiotic interactions: divergence of mycorrhizal fungi between cytotypes of the Gymnadenia conopsea group (Orchidaceae). New Phytologist 199: 1022–1033.

Uhlirova, E., H. Santruckova, a S. P. Davidov. 2007. Quality and potential biodegradability of soil organic matter preserved in permafrost of Siberian tussock tundra. Soil Biology & Biochemistry 39: 1978-1989.

Mastny, J., E. Kaštovská, J. Bárta, A. Chronakova, J. Borovec, H. Santruckova, Z. Urbanova, K. R. Edwards, a T. Picek. 2018. Quality of DOC produced during litter decomposition of peatland plant dominants. Soil Biology & Biochemistry 121: 221-230.

Urbanova, Z., a J. Bárta. 2020. Recovery of methanogenic community and its activity in long-term drained peatlands after rewetting. Ecological Engineering 150: 105852.