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Urbanova, Z., T. Picek, T. Hájek, I. Bufkova, a E. - S. Tuittila. 2012. Vegetation and carbon gas dynamics under a changed hydrological regime in central European peatlands. PLANT ECOLOGY & DIVERSITY 5: 89-103.

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Rakowitz, G., W. Herold, C. Fesl, H. Keckeis, J. Kubečka, a H. Balk. 2008. Two methods to improve the accuracy of target-strength estimates for horizontal beaming. Fisheries Research 93: 324–331.

Gryndler, M., P. Šmilauer, V. Štovíček, K. Nováková, H. Hršelová, a J. Jansa. 2017. Truffle biogeography-A case study revealing ecological niche separation of different Tuber species. Ecology and Evolution 7: 4275-4288.

Blabolil, P., N. P. Griffiths, B. Hanfling, T. Juza, V. Drastik, J. Kneževic-Jaric, Rdos Santos, T. Mrkvička, a J. Peterka. 2022. The true picture of environmental DNA, a case study in harvested fishponds. Ecological Indicators 142: 109241.

Kubečka, J., E. Hohausova, J. Matena, J. Peterka, U. S. Amarasinghe, S. A. Bonar, J. Hateley, P. Hickley, P. Suuronen, V. Tereschenko, R. Welcomme, a I. J. Winfield. 2009. The true picture of a lake or reservoir fish stock: A review of needs and progress. Fisheries Research 96: 1-5.

Kubečka, J., E. Hohausova, J. Matena, J. Peterka, U. S. Amarasinghe, S. A. Bonar, J. Hateley, P. Hickley, P. Suuronen, V. Tereschenko, R. Welcomme, a I. J. Winfield. 2009. The true picture of a lake or reservoir fish stock: A review of needs and progress. Fisheries Research 96: 1-5.

Kubečka, J., E. Hohausova, J. Matena, J. Peterka, U. S. Amarasinghe, S. A. Bonar, J. Hateley, P. Hickley, P. Suuronen, V. Tereschenko, R. Welcomme, a I. J. Winfield. 2009. The true picture of a lake or reservoir fish stock: A review of needs and progress. Fisheries Research 96: 1-5.

Seda, J., J. Hejzlar, a J. Kubečka. 2000. Trophic structure of nine Czech reservoirs regularly stocked with piscivorous fish. Hydrobiologia 429: 141–149.

Prokopchuk, G., T. Korytář, V. Juricová, J. Majstorović, A. Horák, K. Šimek, a J. Lukeš. 2022. Trophic flexibility of marine diplonemids - switching from osmotrophy to bacterivory. ISME Journal , doi:10.1038/s41396-022-01192-0

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Klementová, Š., L. Hornychová, M. Sorf, J. Zemanová, a D. Kahoun. 2019. Toxicity of atrazine and the products of its homogeneous photocatalytic degradation on the aquatic organisms Lemna minor and Daphnia magna. Environmental Science and Pollution Research 26: 27259–27267.

Grossart, H. - P., J. Jezbera, K. Hornak, K. Michelle L. Hutalle, U. Buck, a K. Šimek. 2008. Top-down and bottom-up induced shifts in bacterial abundance, production and community composition in an experimentally divided humic lake. Environmental Microbiology 10: 635-652.

Grossart, H. - P., J. Jezbera, K. Hornak, K. Michelle L. Hutalle, U. Buck, a K. Šimek. 2008. Top-down and bottom-up induced shifts in bacterial abundance, production and community composition in an experimentally divided humic lake. Environmental Microbiology 10: 635-652.

Cooke, S. J., M. F. Docker, N. E. Mandrak, N. Young, D. D. Heath, K. M. Jeffries, A. Howarth, J. W. Brownscombe, J. Livernois, C. A. D. Semeniuk, P. A. Venturelli, A. J. Danylchuk, R. J. Lennox, I. Jarić, A. T. Fisk, C. S. Vandergoot, J. R. Britton, a A. M. Muir. 2022. Technoscience and the modernization of freshwater fisheries assessment and management. Environmental Technology & Innovation 28: 102865.

Cooke, S. J., M. F. Docker, N. E. Mandrak, N. Young, D. D. Heath, K. M. Jeffries, A. Howarth, J. W. Brownscombe, J. Livernois, C. A. D. Semeniuk, P. A. Venturelli, A. J. Danylchuk, R. J. Lennox, I. Jarić, A. T. Fisk, C. S. Vandergoot, J. R. Britton, a A. M. Muir. 2022. Technoscience and the modernization of freshwater fisheries assessment and management. Environmental Technology & Innovation 28: 102865.

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Weinbauer, M. G., K. Hornak, J. Jezbera, J. Nedoma, J. R. Dolan, a K. Šimek. 2007. Synergistic and antagonistic effects of viral lysis and protistan grazing on bacterial biomass, production and diversity. Environmental Microbiology 9: 777-788.

Prescott, C. E., S. J. Greyston, H. - S. Helmisaari, E. Kaštovská, C. Korner, H. Lambers, I. C. Meier, P. Millard, a I. Ostonen. 2020. Surplus Carbon Drives Allocation and Plant–Soil Interactions. Trends in Ecology and Evolution , doi:https://doi.org/10.1016/j.tree.2020.08.007

Hais, M., a T. Kucera. 2008. Surface temperature change of spruce forest as a result of bark beetle attack: remote sensing and GIS approach. European Journal of Forest Research 127: 327-336.

Straskrabova, V., J. Fott, P. Hartman, M. Macek, J. Nedoma, K. Šimek, a J. Vrba. 2000. Structure of pelagic food webs in low-alkalinity lakes - forested and alpine catchments. Silva Gabreta 4: 199 - 211.

Bettarel, Y., J. R. Dolan, K. Hornak, R. Lemee, M. Masin, M. L. Pedrotti, E. Rochelle-Newall, K. Šimek, a T. Sime-Ngando. 2002. Strong, weak and missing links in a microbial community of the NW Mediterranean Sea. FEMS Microbiology Ecology 42: 451–462.

Hornak, K., V. Kasalicky, K. Šimek, a H. - P. Grossart. 2017. Strain-specific consumption and transformation of alga-derived dissolved organic matter by members of the Limnohabitans-C and Polynucleobacter-B clusters of Betaproteobacteria. Environ. Microbiol. 19: 4519–4535.

David S. Boukal, M. Jankovsky, J. Kubečka, a M. Heino. 2012. Stock-catch analysis of carp recreational fisheries in Czech reservoirs: Insights into fish survival, water body productivity and impact of extreme events. FISHERIES RESEARCH 119: 23-32.

Vicherová, E., M. Hájek, P. Šmilauer, a T. Hájek. 2017. Sphagnum establishment in alkaline fens: Importance of weather and water chemistry. Science of the Total Environment 580: 1429-1438.

Vicherová, E., M. Hájek, P. Šmilauer, a T. Hájek. 2017. Sphagnum establishment in alkaline fens: Importance of weather and water chemistry. Science of the Total Environment 580: 1429-1438.

Vicherová, E., M. Hájek, P. Šmilauer, a T. Hájek. 2017. Sphagnum establishment in alkaline fens: importance of weather and water chemistry. Science of the Total Environment 580: 1429-1438.

Vicherová, E., M. Hájek, P. Šmilauer, a T. Hájek. 2017. Sphagnum establishment in alkaline fens: importance of weather and water chemistry. Science of the Total Environment 580: 1429-1438.