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Weinbauer, M. G., K. Hornak, J. Jezbera, J. Nedoma, J. R. Dolan, a K. Šimek. 2007. Synergistic and antagonistic effects of viral lysis and protistan grazing on bacterial biomass, production and diversity. Environmental Microbiology 9: 777-788.

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Cooke, S. J., M. F. Docker, N. E. Mandrak, N. Young, D. D. Heath, K. M. Jeffries, A. Howarth, J. W. Brownscombe, J. Livernois, C. A. D. Semeniuk, P. A. Venturelli, A. J. Danylchuk, R. J. Lennox, I. Jarić, A. T. Fisk, C. S. Vandergoot, J. R. Britton, a A. M. Muir. 2022. Technoscience and the modernization of freshwater fisheries assessment and management. Environmental Technology & Innovation 28: 102865.

Cooke, S. J., M. F. Docker, N. E. Mandrak, N. Young, D. D. Heath, K. M. Jeffries, A. Howarth, J. W. Brownscombe, J. Livernois, C. A. D. Semeniuk, P. A. Venturelli, A. J. Danylchuk, R. J. Lennox, I. Jarić, A. T. Fisk, C. S. Vandergoot, J. R. Britton, a A. M. Muir. 2022. Technoscience and the modernization of freshwater fisheries assessment and management. Environmental Technology & Innovation 28: 102865.

Nweze, J. A., C. V. Olovo, E. Innocent Nweze, O. Okechukwu John, a C. Paul. 2019. Therapeutic Properties of Honey, V.

Grossart, H. - P., J. Jezbera, K. Hornak, K. Michelle L. Hutalle, U. Buck, a K. Šimek. 2008. Top-down and bottom-up induced shifts in bacterial abundance, production and community composition in an experimentally divided humic lake. Environmental Microbiology 10: 635-652.

Starke, R., P. Čapek, D. Morais, S. J. Callister, a N. Jehmlich. 2020. The total microbiome functions in bacteria and fungi. Journal of Proteomics 213, doi:10.1016/j.jprot.2019.103623

Jankovsky, M., David S. Boukal, K. Pivnicka, a J. Kubečka. 2011. Tracing possible drivers of synchronously fluctuating species catches in individual logbook data. FISHERIES MANAGEMENT AND ECOLOGY 18: 297-306.

Prokopchuk, G., T. Korytář, V. Juricová, J. Majstorović, A. Horák, K. Šimek, a J. Lukeš. 2022. Trophic flexibility of marine diplonemids - switching from osmotrophy to bacterivory. ISME Journal , doi:10.1038/s41396-022-01192-0

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Blabolil, P., N. P. Griffiths, B. Hanfling, T. Juza, V. Drastik, J. Kneževic-Jaric, Rdos Santos, T. Mrkvička, a J. Peterka. 2022. The true picture of environmental DNA, a case study in harvested fishponds. Ecological Indicators 142: 109241.

Gryndler, M., P. Šmilauer, V. Štovíček, K. Nováková, H. Hršelová, a J. Jansa. 2017. Truffle biogeography-A case study revealing ecological niche separation of different Tuber species. Ecology and Evolution 7: 4275-4288.

Tesitelova, T., M. Kotilinek, J. Jersakova, F. - X. Joly, J. Kosnar, I. Tatarenko, a M. - A. Selosse. 2015. Two widespread green Neottia species (Orchidaceae) show mycorrhizal preference for Sebacinales in various habitats and ontogenetic stages. Molecular Ecology 24: 1122-1134.

Tesitelova, T., M. Kotilinek, J. Jersakova, F. - X. Joly, J. Kosnar, I. Tatarenko, a M. - A. Selosse. 2015. Two widespread green Neottia species (Orchidaceae) show mycorrhizal preference for Sebacinales in various habitats and ontogenetic stages. Molecular Ecology 24: 1122-1134.

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Vasek, M., O. Jarolim, M. Cech, J. Kubečka, J. Peterka, a M. Prchalova. 2008. The use of pelagic habitat by cyprinids in a deep riverine impoundment: Rimov Reservoir, Czech Republic. Folia Zoologica 57: 324–336.

Vasek, M., M. Prchalova, J. Peterka, H. A. M. Ketelaars, A. J. Wagenvoort, M. Cech, V. Drastik, M. Riha, T. Juza, M. Kratochvil, T. Mrkvička, P. Blabolil, David S. Boukal, J. Duras, a J. Kubečka. 2013. The utility of predatory fish in biomanipulation of deep reservoirs. ECOLOGICAL ENGINEERING 52: 104-111.

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Chmelová, E., V. Kolář, J. Jan, B. M. Carreira, A. Landeira-Dabarca, Š. Otáhalová, M. Poláková, L. Vebrová, J. Borovec, David S. Boukal, a R. Tropek. 2021. Valuable Secondary Habitats or Hazardous Ecological Traps? Environmental Risk Assessment of Minor and Trace Elements in Fly Ash Deposits across the Czech Republic. Sustainability 13: 10385.

Novotná, A. 2023. Variability in Nutrient Use by Orchid Mycorrhizal Fungi in Two Medium Types S. Mennicken [ed.]. Journal of Fungi 9.

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Prach, K., K. Rehounkova, K. Lencova, A. Jirova, P. Konvalinkova, O. Mudrak, V. Student, Z. Vanecek, L. Tichy, P. Petrik, P. Smilauer, a P. Pysek. 2014. Vegetation succession in restoration of disturbed sites in Central Europe: the direction of succession and species richness across 19 seres. Applied Vegetation Science 17: 193–200.

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Latombe, G., B. Lenzner, A. Schertler, S. Dullinger, M. Glaser, I. Jarić, A. Pauchard, J. R. U. Wilson, a F. Essl. 2022. What is valued in conservation? A framework to compare ethical perspectives. NeoBiota 72: 45-80.

Vejřík, L., I. Matějíčková, J. Seda, P. Blabolil, T. Juza, M. Vasek, D. Ricard, J. Matena, J. Frouzová, J. Kubečka, M. Riha, a M. Cech. 2016. Who is who: an anomalous predator-prey role exchange between cyprinids and perch. PLoS ONE , doi:10.1371/journal.pone.0156430

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Sorf, M., T. A. Davidson, S. Brucet, R. F. Menezes, M. Søndergaard, T. L. Lauridsen, F. Landkildehus, L. Liboriussen, a E. Jeppesen. 2015. Zooplankton response to climate warming: a mesocosm experiment at contrasting temperatures and nutrient levels. Hydrobiologia 742: 185-203.