Biblio

Posch, T., B. Mindl, K. Hornak, J. Jezbera, M. M. Salcher, B. Sattler, B. Sonntag, J. Vrba, a K. Šimek. 2007. Biomass reallocation within freshwater bacterioplankton induced by manipulating phosphorus availability and grazing. Aquatic Microbial Ecology 49: 223–232.

Šimek, K., M. G. Weinbauer, K. Hornak, J. Jezbera, J. Nedoma, a J. R. Dolan. 2007. Grazer and virus-induced mortality of bacterioplankton accelerates development of Flectobacillus populations in a freshwater community. Environmental Microbiology 9: 789-800.

Groben, R., M. W. Hahn, K. Hornak, J. Mergeay, K. Šimek, a J. Vrba. 2007. Meeting report: ALTER-net workshop about the "application of molecular techniques to study biodiversity, structure and function of planktonic communities in lakes’’ at Blanes, Spain, February 15-16, 2007. Protist 158: 417-421.

Salcher, M. M., J. Hofer, K. Hornak, J. Jezbera, B. Sonntag, J. Vrba, K. Šimek, a T. Posch. 2007. Modulation of microbial predator-prey dynamics by phosphorus availability: Growth patterns and survival strategies of bacterial phylogenetic clades. FEMS Microbiology Ecology 60: 40–50.

Allers, E., L. Gomez-Consarnau, J. Pinhassi, J. M. Gasol, K. Šimek, a J. Pernthaler. 2007. Response of Alteromonadaceae and Rhodobacteriaceae to glucose and phosphorus manipulation in marine mesocosms. Environmental Microbiology 9: 2417–2429.

Weinbauer, M. G., K. Hornak, J. Jezbera, J. Nedoma, J. R. Dolan, a K. Šimek. 2007. Synergistic and antagonistic effects of viral lysis and protistan grazing on bacterial biomass, production and diversity. Environmental Microbiology 9: 777-788.

Hornak, K., J. Jezbera, J. Nedoma, J. M. Gasol, a K. Šimek. 2006. Effects of resource availability and bacterivory on leucine incorporation in different groups of freshwater bacterioplankton, assessed using microautoradiography. Aquatic Microbial Ecology 45: 277-289.

Nedoma, J., J. - C. Garcia, M. Comerma, K. Šimek, a J. Armengol. 2006. Extracellular phosphatases in a Mediterranean reservoir: seasonal, spatial and kinetic heterogeneity. Freshwater Biology 51: 1264-1276.

Šimek, K., K. Hornak, J. Jezbera, J. Nedoma, J. Vrba, V. Straskrabova, M. Macek, J. R. Dolan, a M. W. Hahn. 2006. Maximum growth rates and possible life strategies of different bacterioplankton groups in relation to phosphorus availability in a freshwater reservoir. Environmental Microbiology 8: 1613–1624.

Jezbera, J., K. Hornak, a K. Šimek. 2006. Prey selectivity of bacterivorous protists in different size fractions of reservoir water amended with nutrients. Environmental Microbiology 8: 1330-1339.

Macek, M., C. Callieri, K. Šimek, a A. Lugo Vazquez. 2006. Seasonal dynamics, composition and feeding patterns of ciliate assemblages in oligotrophic lakes covering a wide pH range. Archiv für Hydrobiologie 166: 261-287.

Hornak, K., M. Masin, J. Jezbera, Y. Bettarel, J. Nedoma, T. Sime-Ngando, a K. Šimek. 2005. Effects of decreased resource availability, protozoan grazing and viral impact on a structure of bacterioplankton assemblage in a canyon-shaped reservoir. FEMS Microbiology Ecology 52: 315-327.

Strojsova, A., J. Vrba, J. Nedoma, a K. Šimek. 2005. Extracellular phosphatase activity of freshwater phytoplankton exposed to different in situ phosphorus concentrations. Marine and Freshwater Research 56: 417–424.

Jezbera, J., K. Hornak, a K. Šimek. 2005. Food selection by bacterivorous protists: insight from the analysis of the food vacuole content by means of Fluorescence In Situ Hybridization. FEMS Microbiology Ecology 52: 351-363.

Šimek, K., K. Hornak, J. Jezbera, M. Masin, J. Nedoma, J. M. Gasol, a M. Schauer. 2005. Influence of top-down and bottom-up manipulations on the R-BT065 subcluster of beta-proteobacteria, an abundant group in bacterioplankton of a freshwater reservoir. Applied And Environmental Microbiology 71: 2381-2390.

Straskrabova, V., K. Šimek, a J. Vrba. 2005. Long-term development of reservoir ecosystems - changes in pelagic food webs and their microbial component. Limnetica 24: 9 - 20.

Vrba, J., C. Callieri, T. Bittl, K. Šimek, R. Bertoni, P. Filandr, P. Hartman, J. Hejzlar, M. Macek, a J. Nedoma. 2004. Are bacteria the major producers of extracellular glycolytic enzymes in aquatic environments?. International Review of Hydrobiology 89: 102–117.

Šimek, K., J. Jezbera, K. Hornak, J. Vrba, a J. Seda. 2004. Role of diatom-attached choanoilagellates of the genus Salpingoeca as pelagic bacterivores. Aquatic Microbial Ecology 36: 257–269.

Comerma, A., J. - C. Garcia, M. Romero, J. Armengol, a K. Šimek. 2003. Carbon flow dynamics in the pelagic community of the Sau Reservoir (Catalonia, NE Spain). Hydrobiologia 504: 87-98.

Masin, M., J. Jezbera, J. Nedoma, V. Straskrabova, J. Hejzlar, a K. Šimek. 2003. Changes in bacterial community composition and microbial activities along the longitudinal axis of two canyon-shaped reservoirs with different inflow loading. Hydrobiologia 504: 99-113.

Šimek, K., K. Hornak, M. Masin, U. Christaki, J. Nedoma, M. G. Weinbauer, a J. R. Dolan. 2003. Comparing the effects of resource enrichment and grazing on a bacterioplankton community of a meso-eutrophic reservoir. Aquatic Microbial Ecology 31: 123-135.

Weinbauer, M. G., U. Christaki, J. Nedoma, a K. Šimek. 2003. Comparing the effects of resource enrichment and grazing on viral production in a meso-eutrophic reservoir. Aquatic Microbial Ecology 31: 137-144.

Jezbera, J., J. Nedoma, a K. Šimek. 2003. Longitudinal changes in protistan bacterivory and bacterial production in two canyon-shaped reservoirs of different trophic status. Hydrobiologia 504: 115-130.

Vrba, J., J. Nedoma, L. Kohout, J. Kopacek, L. Nedbalova, P. Rackova, a K. Šimek. 2003. Massive occurrence of heterotrophic filaments in acidified lakes: seasonal dynamics and composition. FEMS Microbiology Ecology 46: 281–294.

Straskrabova, V., J. Nedoma, K. Šimek, a J. Vrba. 2003. Pelagic microbial assemblages in oligotrophic mountain lakes. Acta Universitatis Ecologiae 10: 15 - 17.