Biblio

Šimek, K., M. Macek, J. Pernthaler, V. Straskrabova, and R. Psenner. 1996. Can freshwater planktonic ciliates survive on a diet of picoplankton?. Journal of Plankton Research 18: 597-613.

Šimek, K., V. Kasalicky, J. Jezbera, J. Jezberova, J. Hejzlar, and M. W. Hahn. 2010. Broad habitat range of the phylogenetically narrow R-BT065 cluster representing a core group of the betaproteobacterial genus Limnohabitans. Applied and Environmental Microbiology 76: 631-639.

Posch, T., B. Mindl, K. Hornak, J. Jezbera, M. M. Salcher, B. Sattler, B. Sonntag, J. Vrba, and K. Šimek. 2007. Biomass reallocation within freshwater bacterioplankton induced by manipulating phosphorus availability and grazing. Aquatic Microbial Ecology 49: 223–232.

Šimek, K., D. W. Hopkins, J. Kalcik, T. Picek, H. Santruckova, J. Stana, and K. Travnik. 1999. Biological and chemical properties of arable soils affected by long-term organic and inorganic fertilizer applications. Biology and Fertility of Soils 29: 300–308.

Šimek, K., and V. Straskrabova. 1992. Bacterioplankton production and protozoan bacterivory in a mesotrophic reservoir. Journal of Plankton Research 14: 773-787.

Hornak, K., J. Jezbera, and K. Šimek. 2010. Bacterial single-cell activities along the nutrient availability gradient in a canyon-shaped reservoir - a seasonal study. Aquatic Microbial Ecology 60: 215-225.

Šimek, K., V. Grujčić, M. W. Hahn, K. Hornak, J. Jezberová, V. Kasalicky, J. Nedoma, M. M. Salcher, and T. Shabarova. 2018. Bacterial prey food characteristics modulate community growth response of freshwater bacterivorous flagellates. Limnol. Oceanogr , doi:10.1002/lno.10759

Chrzanowski, T. H., and K. Šimek. 1993. Bacterial growth and losses due to bacterivory in a mesotrophic lake. Journal of Plankton Research 15: 771-785.

Šimek, K. 1986. Bacterial activity in a reservoir determined by autoradiography and its relationships to phytoplankton and zooplankton. Internationale Revue der Gesamten Hydrobiologie 71: 593-612.

Šimek, K., V. Kasalicky, K. Hornak, M. W. Hahn, and M. G. Weinbauer. 2010. Assessing niche separation in coexisting Limnohabitans strains through interactions with a competitor, viruses, and a bacterivore. Applied and Environmental Microbiology 76: 1406–1416.

Vrba, J., C. Callieri, T. Bittl, K. Šimek, R. Bertoni, P. Filandr, P. Hartman, J. Hejzlar, M. Macek, and J. Nedoma. 2004. Are bacteria the major producers of extracellular glycolytic enzymes in aquatic environments?. International Review of Hydrobiology 89: 102–117.

Šimek, K., J. Nedoma, J. Pernthaler, T. Posch, and J. R. Dolan. 2002. Altering the balance between bacterial production and protistan bacterivory triggers shifts in freshwater bacterial community composition. Antonie van Leeuwenhoek International Journal of General and Molecular Microbiology 81: 453-463.

Šimek, K., V. Kasalicky, E. Zapomelova, and K. Hornak. 2011. Algal-derived substrates select for distinct betaproteobacterial lineages and contribute to niche separation in Limnohabitans strains. Appl. Environ. Microbiol. 77: 7307-7315.

Blom, J. F., K. Hornak, and K. Šimek. 2010. Aggregate formation in a freshwater bacterial strain induced by growth state and conspecific chemical cues. Environmental Microbiology 12: 2486-2495.

Kasalicky, V., Y. Zeng, K. Piwosz, K. Šimek, H. Kratochvilová, and M. Koblizek. 2018. Aerobic anoxygenic photosynthesis is commonly present within the genus Limnohabitans. Applied and Environmental Microbiology 84: e02116-17.

Fott, J., E. Stuchlik, Z. Stuchlikova, V. Straskrabova, J. Kopacek, and K. Šimek. 1992. Acidification of lakes in Tatra Mountains (Czechoslovakia) and its ecological consequences. Documenta Ist. ital. Idrobiol. 32: 69-81.

Vrba, J., K. Šimek, J. Nedoma, and P. Hartman. 1993. 4-methylumbelliferyl-beta-N-acetylglucosaminide hydrolysis by a high-affinity enzyme, a putative marker of protozoan bacterivory. Applied and Environmental Microbiology 59: 3091–3101.