Biblio

Jezberova, J., J. Jezbera, P. Znachor, J. Nedoma, V. Kasalicky, and K. Šimek. 2017. Limnohabitans genus harbor generalist and opportunist genotype groups: evidence from spatiotemporal succession in a canyon-shaped reservoir. Appl. Environ. Microbiol. 83: e01530-17.

Šimek, K., J. Nedoma, P. Znachor, V. Kasalicky, J. Jezbera, K. Hornak, and J. Seda. 2014. A finely tuned symphony of factors modulates the microbial food web of a freshwater reservoir in spring. Limnology and Oceanography 59: 1477–1492.

Šimek, K., V. Kasalicky, J. Jezbera, K. Hornak, J. Nedoma, M. W. Hahn, D. Bass, S. Jost, and J. Boenigk. 2013. Differential freshwater flagellate community response to bacterial food quality with a focus on Limnohabitans bacteria. ISME Journal 7: 1519-1530.

Kasalicky, V., J. Jezbera, K. Šimek, and M. W. Hahn. 2013. The diversity of the Limnohabitans genus, an important group of freshwater bacterioplankton, by characterization of 35 isolated strains. PLoS ONE 8: e58209.

Jezbera, J., J. Jezberova, V. Kasalicky, K. Šimek, and M. W. Hahn. 2013. Patterns of Limnohabitans microdiversity across a large set of freshwater habitats as revealed by Reverse Line Blot Hybridization. PLoS ONE 8: e58527.

Jezbera, J., J. Jezberova, U. Koll, K. Hornak, K. Šimek, and M. W. Hahn. 2012. Contrasting trends in distribution of four major planktonic betaproteobacterial groups along a pH gradient of epilimnia of 72 freshwater habitats. FEMS Microbiology Ecology 81: 467-479.

Hahn, M. W., T. Scheuerl, J. Jezberova, U. Koll, J. Jezbera, K. Šimek, C. Vannini, G. Petroni, and Q. L. Wu. 2012. The Passive Yet Successful Way of Planktonic Life: Genomic and Experimental Analysis of the Ecology of a Free-Living Polynucleobacter Population. PLoS ONE 7: e32772.

Hornak, K., J. Jezbera, and K. Šimek. 2010. Bacterial single-cell activities along the nutrient availability gradient in a canyon-shaped reservoir - a seasonal study. Aquatic Microbial Ecology 60: 215-225.

Šimek, K., V. Kasalicky, J. Jezbera, J. Jezberova, J. Hejzlar, and M. W. Hahn. 2010. Broad habitat range of the phylogenetically narrow R-BT065 cluster representing a core group of the betaproteobacterial genus Limnohabitans. Applied and Environmental Microbiology 76: 631-639.

Hahn, M. W., V. Kasalicky, J. Jezbera, U. Brandt, and K. Šimek. 2010. Limnohabitans australis sp. nov., isolated from a freshwater. J. Syst. Evol. Microbiol 60: 2946 - 2950.

Hahn, M. W., V. Kasalicky, J. Jezbera, U. Brandt, J. Jezberova, and K. Šimek. 2010. Limnohabitans curvus gen. nov., sp. nov., a planktonic bacterium isolated from a freshwater lake. International Journal of Systematic and Evolutionary Microbiology 60: 1358-1365.

Kasalicky, V., J. Jezbera, K. Šimek, and M. W. Hahn. 2010. Limnohabitans planktonicus sp. nov., and Limnohabitans parvus sp. nov., two novel planktonic Betaproteobacteria isolated from a freshwater reservoir. International Journal of Systematic and Evolutionary Microbiology 60: 2710 - 2714.

Tanaka, T., F. T. Thingstad, J. M. Gasol, C. Cardelus, J. Jezbera, M. M. Sala, K. Šimek, and F. Unrein. 2009. Determining the availability of phosphate and glucose for bacteria in P-limited mesocosms of NW Mediterranean surface waters. Aquatic Microbial Ecology 56: 81-91.

Hornak, K., J. Jezbera, and K. Šimek. 2008. Effects of a Microcystis aeruginosa bloom and bacterivory on bacterial abundance and activity in a eutrophic reservoir. Aquatic Microbial Ecology 52: 107-117.

Šimek, K., K. Hornak, J. Jezbera, J. Nedoma, P. Znachor, J. Hejzlar, and J. Seda. 2008. Spatio-temporal patterns of bacterioplankton production and community composition related to phytoplankton composition and protistan bacterivory in a dam reservoir. Aquatic Microbial Ecology 51: 249-262.

Grossart, H. - P., J. Jezbera, K. Hornak, K. Michelle L. Hutalle, U. Buck, and K. Šimek. 2008. Top-down and bottom-up induced shifts in bacterial abundance, production and community composition in an experimentally divided humic lake. Environmental Microbiology 10: 635-652.

Posch, T., B. Mindl, K. Hornak, J. Jezbera, M. M. Salcher, B. Sattler, B. Sonntag, J. Vrba, and K. Šimek. 2007. Biomass reallocation within freshwater bacterioplankton induced by manipulating phosphorus availability and grazing. Aquatic Microbial Ecology 49: 223–232.

Šimek, K., M. G. Weinbauer, K. Hornak, J. Jezbera, J. Nedoma, and J. R. Dolan. 2007. Grazer and virus-induced mortality of bacterioplankton accelerates development of Flectobacillus populations in a freshwater community. Environmental Microbiology 9: 789-800.

Salcher, M. M., J. Hofer, K. Hornak, J. Jezbera, B. Sonntag, J. Vrba, K. Šimek, and T. Posch. 2007. Modulation of microbial predator-prey dynamics by phosphorus availability: Growth patterns and survival strategies of bacterial phylogenetic clades. FEMS Microbiology Ecology 60: 40–50.

Weinbauer, M. G., K. Hornak, J. Jezbera, J. Nedoma, J. R. Dolan, and K. Šimek. 2007. Synergistic and antagonistic effects of viral lysis and protistan grazing on bacterial biomass, production and diversity. Environmental Microbiology 9: 777-788.

Hornak, K., J. Jezbera, J. Nedoma, J. M. Gasol, and K. Šimek. 2006. Effects of resource availability and bacterivory on leucine incorporation in different groups of freshwater bacterioplankton, assessed using microautoradiography. Aquatic Microbial Ecology 45: 277-289.

Šimek, K., K. Hornak, J. Jezbera, J. Nedoma, J. Vrba, V. Straskrabova, M. Macek, J. R. Dolan, and M. W. Hahn. 2006. Maximum growth rates and possible life strategies of different bacterioplankton groups in relation to phosphorus availability in a freshwater reservoir. Environmental Microbiology 8: 1613–1624.

Jezbera, J., K. Hornak, and K. Šimek. 2006. Prey selectivity of bacterivorous protists in different size fractions of reservoir water amended with nutrients. Environmental Microbiology 8: 1330-1339.

Hornak, K., M. Masin, J. Jezbera, Y. Bettarel, J. Nedoma, T. Sime-Ngando, and K. Šimek. 2005. Effects of decreased resource availability, protozoan grazing and viral impact on a structure of bacterioplankton assemblage in a canyon-shaped reservoir. FEMS Microbiology Ecology 52: 315-327.

Jezbera, J., K. Hornak, and K. Šimek. 2005. Food selection by bacterivorous protists: insight from the analysis of the food vacuole content by means of Fluorescence In Situ Hybridization. FEMS Microbiology Ecology 52: 351-363.