Biblio

Kucera, T., V. Kunca, and J. Holec. 2019. Comparison of habitats of the rare fungus Pluteus fenzlii between Białowieża Virgin Forest (Poland) and thermophilous forests (Slovakia). Plant and Fungal Systematics 64: 101–110.

Kopacek, J., J. Kaňa, P. Porcal, J. Vrba, and S. A. Norton. 2019. Effects of tree dieback on lake water acidity in the unmanaged catchment of Plešné Lake, Czech Republic. Limnology and Oceanography 64: 1614–1626.

Brook, B. W., J. C. Buettel, and I. Jarić. 2019. A fast re-sampling method for using reliability ratings of sightings with extinction-date estimators. Ecology 100: e02787.

Šimek, K., and D. Sirova. 2019. Fluorescently labeled bacteria used as a tracer can reveal novel pathways of organic carbon flow in aquatic ecosystems. Journal of Visualized Experiments 151: e59903.

Correia, R. A., E. Di Minin, I. Jarić, P. Jepson, R. Ladle, J. Mittermeier, U. Roll, A. Soriano-Redondo, and D. Veríssimo. 2019. Inferring public interest from search engine data requires caution. Frontiers in Ecology and the Environment 17: 254-255.

Holec, J., J. Běťák, D. Dvořák, M. Kříž, M. Kuchaříková, R. Krzyšciak-Kosińska, and T. Kucera. 2019. Macrofungi on fallen oak trunks in the Białowieża Virgin Forest - ecological role of trunk parameters and surrounding vegetation. Czech Mycology 71: 65-89.

Francová, K., K. Šumberová, A. Kučerová, M. Čtvrtlíková, M. Sorf, J. Borovec, B. Drozd, G. A. Janauer, and J. Vrba. 2019. Macrophyte assemblages in fishponds under different fish farming management. Aquatic Botany 159: 103131.

Šimek, K., V. Grujčić, J. Nedoma, J. Jezberová, M. Šorf, A. Matoušů, L. Pechar, T. Posch, E. P. Bruni, and J. Vrba. 2019. Microbial food webs in hypertrophic fishponds: omnivorous ciliate taxa are major protistan bacterivores. Limnology and Oceanography 64: 2295–2309.

Brown, J. J., S. Mennicken, J. C. Massante, S. Dijoux, A. Telea, A. M. Benedek, L. Götzenberger, M. Májeková, J. Lepš, P. Šmilauer, J. Hrček, and F. de Bello. 2019. A novel method to predict dark diversity using unconstrained ordination analysis. Journal of Vegetation Science , doi:10.1111/jvs.12757

Zemanová, J., M. Sorf, J. Hejzlar, V. Šorfová, and J. Vrba. 2019. Planktivorous fish positively select Daphnia bearing advanced embryos. Marine and Freshwater Research , doi:10.1071/MF18466

Kolář, V., D. S. Boukal, and A. Sentis. 2019. Predation risk and habitat complexity modify intermediate predator feeding rates and energetic efficiencies in a tri‐trophic system. Freshwater Biology , doi:10.1111/fwb.13320

Jarić, I., F. Quétier, and Y. Meinard. 2019. Procrustean beds and empty boxes: On the magic of creating environmental data. Biological Conservation 237: 248-252.

Bednařík, A., A. Matoušů, M. Blaser, M. Tušer, M. Rulík, K. Šimek, and P. P. Chaudhary. 2019. Study of methane-related processes in sediments along the longitudinal profile of the Elbe River. Limnologica 79: 125716.

Kana, J., J. Kopacek, K. Tahovska, and H. Santruckova. 2019. Tree dieback and related changes in nitrogen dynamics modify the concentrations and proportions of cations on soil sorption complex. Ecological Indicators 97: 319–328.

Kasalicky, V., Y. Zeng, K. Piwosz, K. Šimek, H. Kratochvilová, and M. Koblizek. 2018. Aerobic anoxygenic photosynthesis is commonly present within the genus Limnohabitans. Applied and Environmental Microbiology 84: e02116-17.

Šimek, K., V. Grujčić, M. W. Hahn, K. Hornak, J. Jezberova, V. Kasalicky, J. Nedoma, M. M. Salcher, and T. Shabarova. 2018. Bacterial prey food characteristics modulate community growth response of freshwater bacterivorous flagellates. Limnol. Oceanogr , doi:10.1002/lno.10759

Oulehle, F., K. Tahovska, T. Chuman, C. D. Evans, J. Hruska, M. Růžek, and J. Bárta. 2018. Comparison of the impacts of acid and nitrogen additions on carbon fluxes in European conifer and broadleaf forests. ENVIRONMENTAL POLLUTION 238: 884–893.

Kastovska, E., P. Strakova, K. R. Edwards, Z. Urbanova, J. Bárta, J. Mastny, H. Santruckova, and T. Picek. 2018. Cotton-Grass and Blueberry have Opposite Effect on Peat Characteristics and Nutrient Transformation in Peatland. Ecosystems 21: 443-458.

Grujčić, V., J. Nuy, M. Salcher, T. Shabarova, V. Kasalicky, J. Boenigk, M. Jensen, and K. Šimek. 2018. Cryptophyta as major freshwater bacterivores in experiments with manipulated bacterial prey. ISME

Piwosz, P., T. Shabarova, J. Tomasch, K. Šimek, K. Kopejtka, S. Kahl, D. H. Pieper, and M. Koblizek. 2018. Determining lineage-specific bacterial growth dynamics with a novel approach based on amplicon reads normalization using internal standard (ARNIS). ISME J. 12: 2640-2654.

Latombe, G., D. M. Richardson, P. Pysek, and T. Kucera. 2018. Drivers of species turnover vary with species commonness for native and alien plants with different residence times. Ecology 99: 2763–2775.

Vrba, J., M. Macholdová, L. Nedbalova, J. Nedoma, and M. Sorf. 2018. An experimental insight into extracellular phosphatases – differential induction of cell-specific activity in green algae cultured under various phosphorus conditions. Frontiers in Microbiology 9, doi:10.3389/fmicb.2018.00271

Rejmankova, E., D. Sirova, C. S. T., J. Bárta, and C. H. 2018. Heterotrophic N2-fixation contributes to nitrogen economy of a common wetland sedge, Schoenoplectus californicus. PLoS ONE 13, doi:10.1371/journal.pone.0195570

Mehrshad, M., M. M. Salcher, Y. Okazaki, S. Nakano, K. Šimek, S. A. Andrei, and R. Ghai. 2018. Hidden in plain sight - highly abundant and diverse planktonic freshwater Chloroflexi. Microbiome 176.

Sirova, D., J. Bárta, K. Šimek, T. Posch, J. Pech, J. Stone, J. Borovec, L. Adamec, and J. Vrba. 2018. Hunters or farmers? Microbiome characteristics help elucidate the diet composition in an aquatic carnivorous plant. Microbiome 225, doi:10.1186/s40168-018-0600-7