Biblio

Šimek, K., J. Nedoma, P. Znachor, V. Kasalicky, J. Jezbera, K. Hornak, a J. Seda. 2014. A finely tuned symphony of factors modulates the microbial food web of a freshwater reservoir in spring. Limnology and Oceanography 59: 1477–1492.

Šimek, K., M. G. Weinbauer, K. Hornak, J. Jezbera, J. Nedoma, a J. R. Dolan. 2007. Grazer and virus-induced mortality of bacterioplankton accelerates development of Flectobacillus populations in a freshwater community. Environmental Microbiology 9: 789-800.

Bittl, T., J. Vrba, J. Nedoma, a J. Kopacek. 2001. Impact of ionic aluminium on extracellular phosphatases in acidified lakes. Environmental Microbiology 3: 578-587.

Vyhnalek, V., J. Hejzlar, J. Nedoma, a J. Vrba. 1993. Importance of the River Inflow For the Spring Development of Plankton In Rimov Reservoir (czechoslovakia). Advances In Limnology, Vol 40 - Proceedings of the Second International Conference On Reservoir Limnology and Water Quality 40: 51–56.

Šimek, K., K. Hornak, J. Jezbera, M. Masin, J. Nedoma, J. M. Gasol, a M. Schauer. 2005. Influence of top-down and bottom-up manipulations on the R-BT065 subcluster of beta-proteobacteria, an abundant group in bacterioplankton of a freshwater reservoir. Applied And Environmental Microbiology 71: 2381-2390.

Straskrabova, V., C. Callieri, P. Carrillo, L. Cruz-Pizarro, J. Fott, P. Hartman, M. Macek, J. M. Medina-Sanchez, J. Nedoma, a K. Šimek. 1999. Investigations on pelagic food webs in mountain lake - aims and methods. Journal of Limnology 58: 77-87.

Vrba, J., J. Kopacek, T. Bittl, J. Nedoma, A. Strojsova, L. Nedbalova, L. Kohout, a J. Fott. 2006. A key role of aluminium in phosphorus availability, food web structure, and plankton dynamics in strongly acidified lakes. Biologia 61: S441–S451.

Ctvrtlikova, M., J. Hejzlar, J. Vrba, J. Kopacek, J. Nedoma, P. Hekera, A. J. Wade, a S. Roy. 2016. Lake water acidification and temperature have a lagged effect on the population dynamics of Isoëtes echinospora via offspring recruitment. Ecological Indicators 70: 420-430.

Jezberova, J., J. Jezbera, P. Znachor, J. Nedoma, V. Kasalicky, a K. Šimek. 2017. Limnohabitans genus harbor generalist and opportunist genotype groups: evidence from spatiotemporal succession in a canyon-shaped reservoir. Appl. Environ. Microbiol. 83: e01530-17.

Jezbera, J., J. Nedoma, a K. Šimek. 2003. Longitudinal changes in protistan bacterivory and bacterial production in two canyon-shaped reservoirs of different trophic status. Hydrobiologia 504: 115-130.

Vrba, J., J. Nedoma, L. Kohout, J. Kopacek, L. Nedbalova, P. Rackova, a K. Šimek. 2003. Massive occurrence of heterotrophic filaments in acidified lakes: seasonal dynamics and composition. FEMS Microbiology Ecology 46: 281–294.

Šimek, K., K. Hornak, J. Jezbera, J. Nedoma, J. Vrba, V. Straskrabova, M. Macek, J. R. Dolan, a M. W. Hahn. 2006. Maximum growth rates and possible life strategies of different bacterioplankton groups in relation to phosphorus availability in a freshwater reservoir. Environmental Microbiology 8: 1613–1624.

Vrba, J., J. Nedoma, K. Šimek, a J. Seda. 1992. Microbial decomposition of polymer organic matter related to plankton development in a reservoir - activity of alpha-glucosidase, beta-glucosidase, and beta-N-acetylglucosaminidase and uptake of N-acetylglucosamine. Archiv für Hydrobiologie 126: 193–211.

Šimek, K., D. Babenzien, T. Bittl, R. Koschel, M. Macek, J. Nedoma, a J. Vrba. 1998. Microbial food webs in an artificially divided acidic bog lake. International Review of Hydrobiology 83: 3–18.

Šimek, K., J. Vrba, J. Pernthaler, T. Posch, P. Hartman, J. Nedoma, a R. Psenner. 1997. Morphological and compositional shifts in an experimental bacterial community influenced by protists with contrasting feeding modes. Applied and Environmental Microbiology 63: 587–595.

Znachor, P., J. Nedoma, J. Hejzlar, J. Seda, J. Kopacek, David S. Boukal, a T. Mrkvička. 2018. Multiple long-term trends and trend reversals dominate environmental conditions in a man-made freshwater reservoir. Science of the Total Environment , doi:10.1016/j.scitotenv.2017.12.061

Nedoma, J., J. Vrba, J. Hejzlar, K. Šimek, a V. Straskrabova. 1994. N-acetylglucosamine dynamics in freshwater environment: concentration of amino-sugars, extracellular enzyme activities, and microbial uptake. Limnology and Oceanography 39: 1088-1100.

Kopacek, J., M. Brzakova, J. Hejzlar, J. Nedoma, P. Porcal, a J. Vrba. 2004. Nutrient cycling in a strongly acidified mesotrophic lake. Limnology and Oceanography 49: 1202-1213.

Straskrabova, V., J. Nedoma, K. Šimek, a J. Vrba. 2003. Pelagic microbial assemblages in oligotrophic mountain lakes. Acta Universitatis Ecologiae 10: 15 - 17.

Porcal, P., K. Frejlachova, J. Kopacek, J. Nedoma, a T. Šavrdová. 2017. Photochemical cleaving of allochthonous organic-metal complexes contributes to phosphorus immobilization in surface waters. Chemosphere 167: 374-381.

Posch, T., K. Šimek, J. Vrba, S. Pernthaler, J. Nedoma, B. Sattler, B. Sonntag, a R. Psenner. 1999. Predator-induced changes of bacterial size-structure and productivity studied on an experimental microbial community. Aquatic Microbial Ecology 18: 235–246.

Nedoma, J., V. Straskrabova, P. Znachor, a J. Vrba. 2003. Primary and bacterial production in three acidified lakes in the Bohemian Forest. Silva Gabreta 9: 53 - 70.

Nedoma, J., J. Vrba, T. Hanzl, a L. Nedbalova. 2001. Quantification of pelagic filamentous microorganisms in aquatic environments using the line-intercept method. FEMS Microbiology Ecology 38: 81-85.

Gabaldón, C., M. Devetter, J. Hejzlar, K. Šimek, P. Znachor, J. Nedoma, a J. Seda. 2017. : Repeated flood disturbance enhances rotifer dominance and diversity in a zooplankton community of a small dammed mountain pond. J. Limnol. 76: 292-304.

Vrba, J., J. Nedoma, a P. Filandr. 1996. Resolving complex saturation kinetics: a potential tool in interpretation of extracellular beta-N-acetylhexosaminidase data from natural freshwaters R.A.A. Muzzarelli [ed.]. Chitin enzymology 2: 303-311.